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of host–pathogen interactions with the development of next-generation sequencing (NGS)-based assays to create advanced tools for detecting pathogens and adventitious agents, thereby improving product safety
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: This research project aims to investigate the capabilities of long-read next-generation sequencing (NGS) technologies for adventitious virus detection in a complex matrix mimicking a biological test material. The
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workflows for expansion to more species over time. Overall, this novel tool kit will be adaptable for multiple agriculturally important species to rapidly apply genome editing technology and acquire
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of an invasive ectoparasite. We will obtain male and female adult ticks of ALT from native and expansion ranges and extract DNA, RNA, and epigenetic data such as chromosome accessibility sequences. We will adapt
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Description *Applications are reviewed on a rolling-basis. ARS Office/Lab and Location: Multiple research opportunities in honey bee parasites are currently available with the U.S. Department of Agriculture
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poorly annotated. This is primarily due to their small size and repetitive nature that results in difficulties in sequencing and assembly. In the last three years, USDA-ARS has invested significantly in
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, and publication list In your cover letter, please explicitly detail your experience with genomic and transcriptomic approaches, highlighting how your skills align with the research focus
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biologists, and computational scientists to understand and mitigate major disease threats to rice. Ongoing research addresses multiple pathogens and pests of economic importance, including rice blast, sheath
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sequencing in cattle. Developing better statistical methods to improve association studies with QTL and enhancing genetic prediction tools for automation of data processing required for SNP use in livestock
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Description *Applications are reviewed on a rolling-basis. ARS Office/Lab and Location: Multiple research opportunities in honey bee parasites are currently available with the U.S. Department of Agriculture